Introducing a Cheminformatics Similarity Search Solution
■ The Associative Processing Unit (APU) is GSI's patented processing technology and a new breed of processor. It features massive parallel data processing, compute and search, in-place, directly in the memory array. The APU’s design eliminates bandwidth-costly data transfers between the memory and processor. This gives the APU a performance edge in the acceleration of similarity search applications.
● Gemini® APU Benefits:
■ Support for similarity structure search on circular fingerprints at thresholds of 0.8 and under.
■ Easy integration with BIOVIA – proven and fully tested.
■ Gemini® can be integrated into other molecule search solutions that use the Tanimoto coefficient.
■ Support for single or multiple queries on Enamine REAL database (680M compounds), all on a single APU.
■ Calculation of more descriptive, larger length, folded fingerprints (bit sizes of 256, 512, 1024, and up to 8192).
■ Multiple databases can be loaded into the APU’s system memory. Single dataset can be chosen for a specific query.
■ Batches of compounds (100s or 1000s) can be submitted simultaneously.
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Solutions |
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Please see the document for details |
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English Chinese Chinese and English Japanese |
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03/2021 |
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Rev. 1.02, |
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1.2 MB |
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